IsoLife – Stable Isotope Labelled Plant Products for the Life Sciences

Publications based on IsoLife‘s products or services


Tamang M, J Sikorski, M van Bommel, M Piecha, T Urich, L Ruess, KJ Huber, M Neumann-Schaal, M Pester. 2024.
Succession of bacteria and archaea within the soil micro-food web.
bioRxiv 10:

Duran K, M Kohlstedt, G van Erven, CE Klostermann, AHP America, E Bakx, JJP Baars, A Gorissen, R de Visser, RP de Vries, C Wittmann, RNJ Comans, TW Kuyper, MA Kabel. 2024.
From 13C-lignin to 13C-mycelium: Agaricus bisporus uses polymeric lignin as a carbon source.
Science Advances 10: eadl3419.

Schwab ST, TF Nelson, S Mecking. 2024.
Chemically recyclable and biodegradable vulcanized rubber.
ACS Sustainable Chemistry & Engineering 12: 6281-6288.

Dasgupta D, AE Richardson, LA Camuy-Vélez, C Kirkby, JA Kirkegaard, S Banerjee. 2024.
Microbial dynamics during in-situ organic matter decomposition reveals the importance of keystone taxa in the core microbiome.
Applied Soil Ecology 199: 105396.

Vesamäki J. 2024.
Plant microbial interactive effects on soil carbon in relation to soil structure.
PhD Thesis. University of Jyväskylä.

Nweze JE, S Gupta, MM Salcher, V Šustr, T Horváthová, R Angel. 2024.
Cellulose fermentation by the gut microbiota is likely not essential for the nutrition of millipedes.

Yoshioka K, H Kim, F Lu, N De Ridder, R Vanholme, S Kajita, W Boerjan, J Ralph. 2024.
Hydroxycinnamaldehyde-derived benzofuran components in lignins.
Plant Physiology 194: 1370–1382.

Van Trijp MPH, M Rios-Morales, B Witteman, F Abegaz, A Gerding, R An, M Koehorst, B Evers, KCV van Dongen, EG Zoetendal, H Schols, LA Afman, D-J Reijngoud, BM Bakker, GJ Hooiveld. 2024.
Intraintestinal fermentation of fructo- and galacto-oligosaccharides and the fate of short-chain fatty acids in humans.
iScience 27: 109208.

Duan X, A Gunina, Y Rui, Y Xia, Y Hu, C Ma, H Qiao, Y Zhang, J Wu, Y Su, X Chen. 2024.
Contrasting processes of microbial anabolism and necromass formation between upland and paddy soils across regional scales.
Catena 239: 107902.

Xue Y, Li H, Kang X. 2024.
Molecular unraveling of polysaccharide digestion in wood-feeding termites: A solid-state NMR perspective.
Carbohydrate Polymers: 121843.

Husain H, C Keitel, FA Dijkstra. 2024.
Fungi are more important than bacteria for soil carbon loss through priming effects and carbon protection through aggregation.
Applied Soil Ecology 195: 105245.

Duran K. 2023.
From plant to fungal biomass: Agaricus bisporus can utilise lignin and humic substances.
PhD Thesis. Wageningen University.

Husain HMM 2023.
Plant microbial interactive effects on soil carbon in relation to soil structure.
PhD Thesis. University of Sydney.

Poulsen JS, WV Macêdo, T Bonde, JL Nielsen. 2023.
Energetically exploiting lignocellulose-rich residues in anaerobic digestion technologies: from bioreactors to proteogenomics.
Biotechnology for Biofuels and Bioproducts 16: 183.

Zhao W. 2023.
Structural elucidation of lignocellulose and wetland soil by solid-state NMR and dynamic nuclear polarization.
PhD Thesis. Michigan State University.

Su Y, H Fan, S Jia, M Yu, Y Wang, A Shen. 2023.
Microplastic stress affects the allocation of straw-derived carbon by weakening soil microbial interactions.

Sapouna I, G van Erven, E Heidling, M Lawoko, LS McKee. 2023.
Impact of extraction method on the structure of lignin from ball-milled hardwood.
ACS Sustainable Chemistry & Engineering 11: 15533–15543.

Hartmann M, C Herzog, I Brunner, B Stierli, F Meyer, N Buchmann, B Frey. 2023.
Long-term mitigation of drought changes the functional potential and life-strategies of the forest soil microbiome involved in organic matter decomposition.
Frontiers in Microbiology 14: 1267270.

Yoshioka K, H Kim, F Lu, N de Ridder, R Vanholme, S Kajita, W Boerjan, J Ralph. 2023.
Hydroxycinnamaldehyde-derived benzofuran components in lignins.
Plant Physiology

Wu S, J Bougoure, J Wang, L Thomsen, T-S Chan, Q Yi, Z Li, G Southam, L Huang. 2023.
Nitrogen-rich organic matter formation and stabilization in iron ore tailings: A submicrometer investigation.
Environmental Science & Technology 57: 12325–12338.

Bonin P, A Portas, J Hardy, S Guasco, TS Bianchi, ND Ward, JF Rontani. 2023.
Biological mechanisms underlying priming of vascular plant material in the presence of diatoms.
Aquatic Microbial Ecology 89: 99-117.

Tasaki E, Y Mitaka, Y Takahashi, ASM Waliullah, Z Tamannaa, T Sakamoto, A Islam, M Kamiya, T Sato, S Aramaki, K Kikushima, M Horikawa, K Nakamura, T Kahyo, M Takata, M Setou, K Matsuura. 2023.
The royal food of termites shows king and queen specificity.
PNAS Nexus 2: 1-12.

Wei W, CC Wong, Z Jia, W Liu, C Liu, F Ji, Y Pan, F Wang, G Wang, L Zhao, ESH Chu, X Zhang, JJY Sung, J Yu. 2023.
Parabacteroides distasonis uses dietary inulin to suppress NASH via its metabolite pentadecanoic acid.
Nature Microbiology 8: 1534–1548.

Lysak DH, M Grisi, K Marable, GM Conley, CA Michal, V Moxley-Paquette, WW Wolff, K Downey, FVC Kock, PM Costa, K Ronda, TB Moraes, K Steiner, LA Colnago, AJ Simpson. 2023.
Exploring the potential of broadband complementary metal oxide semiconductor micro-coil nuclear magnetic resonance for environmental research.
Molecules 28: 5080.

Duran K, J Miebach, G van Erven, JJP Baars, RNJ Comans, TW Kuyper, MA Kabel. 2023.
Oxidation-driven lignin removal by Agaricus bisporus from wheat straw based compost at industrial scale.
International Journal of Biological Macromolecules 246: 125575.

Duran K, J Magnin, AHP America, M Peng, R Hilgers, RP de Vries, JJP Baars, WJH van Berkel, TW Kuyper, MA Kabel. 2023.
The secretome of Agaricus bisporus: Temporal dynamics of plant polysaccharides and lignin degradation.
iScience 26: 107087.

Nasfi M, M Carrier, S Salvador. 2023.
Kinetic modelling of biomass fast devolatilization using Py-MS: Model-free and model-based approaches.
Journal of Analytical and Applied Pyrolysis 174: 106128.

Nasfi M. 2023.
Unraveling transport phenomena and chemical kinetics during biomass fast pyrolysis.
PhD Thesis. University of Toulouse.

Kou X, E. Morriën, Y Tian, X Zhang, C Lu, H Xie, W Liang, Q Li, C. Liang. 2023.
Exogenous carbon turnover within the soil food web strengthens soil carbon sequestration through microbial necromass accumulation.
Global Change Biology 29: 4069–4080.

Taipale SJ, C Rigaud, ML Calderini, MJ Kainz, M Pilecky, S Uusi-Heikkilä, JS Vesamäki, K Vuorio, M Tiirola. 2023.
The second life of terrestrial and plastic carbon as nutritionally valuable food for aquatic consumers.
Ecology Letters 26: 1336–1347.

Li H, X Kang, M Yang, BD Kasseney, X Zhou, S Liang, X Zhang, J-L Wen, B Yu, N Liu, Y Zhao, J Mo, CR Currie, J Ralph, DJ Yelle. 2023.
Molecular insights into the evolution of woody plant decay in the gut of termites.
Science Advances 9, eadg1258.

Van Erven G, P Hendrickx, MA Hassan, B Beelen, R op den Kamp, E Keijsers, K van der Cruijsen, LM Trindade, PFH Harmsen, AF van Peer. 2023.
Plant genotype and fungal strain harmonization improves Miscanthus sinensis conversion by the white-rot fungus Ceriporiopsis subvermispora.
ACS Sustainable Chemistry & Engineering 11: 6752−6764.

Warren CR, OM Butler. 2023.
Turnover of non-polymeric leaf lipids in a loamy grassland soil.
Plant and Soil 489: 385–403.

Palmer M, JK Covington, E-M Zhou, SC Thomas, N Habib, CO Seymour, D Lai, J Johnston, A Hashimi, J-Y Jiao, AR Muok, L Liu, W-D Xian, X-Y Zhi, M-M Li, LP Silva, BP Bowen, K Louie, A Briegel, J Pett-Ridge, PK Weber, EI Tocheva, T Woyke, TR Northen, X Mayali, W-J Li, BP Hedlund. 2023.
Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past.
NATURE – The ISME Journal 17: 952–966.

Yang J, M Han, B Wang, B Yao, Z Wu, X Li, L Liu, H Dong, H Jiang. 2023.
Predominance of positive priming effects induced by algal and terrestrial organic matter input in saline lake sediments.
Geochimica et Cosmochimica Acta 349: 126-134.

Wild B, S Monteux, B Wendler, G Hugelius, F Keuper. 2023.
Circum-Arctic peat soils resist priming by plant-derived compounds.
Soil Biology and Biochemistry 180: 109012.

Bljahhina A, Pismennõi D, Krišciunaite T, Kuhtinskaja M, Kobrin E-G. 2023.
Quantitative analysis of oat (Avena sativa L.) and pea (Pisum sativum L.) saponins in plant-based food products by hydrophilic interaction liquid chromatography coupled with mass spectrometry.
Foods 12: 991.

Ullah MR, Y Carrillo, FA Dijkstra. 2023.
Relative contributions of fungi and bacteria to litter decomposition under low and high soil moisture in an Australian grassland.
Applied Soil Ecology 182: 104737.

Štursová M, R López-Mondéjar, P Baldrian. 2023.
Investigating the bacterial and fungal communities involved in dead biomass degradation in forest soils.
In: Martin F, S Uroz, eds. Methods in Molecular Biology, Microbial Environmental Genomics (MEG). Volume 2605: 157-168. Springer, NY.

Qiu Q, M Li, AS Mgelwa, Y-L Hu. 2023.
Divergent mineralization of exogenous organic substrates and their priming effects depending on soil types.
Biology and Fertility of Soils 59: 87–101.

Kouzounis D, G van Erven, N Soares, MA Kabel, HA Schols. 2023.
The fate of insoluble arabinoxylan and lignin in broilers: Influence of cereal type and dietary enzymes.
International Journal of Biological Macromolecules 225: 1096-1106.

Lund PJ, LA Gates, M Leboeuf, SA Smith, L Chau, ES Friedman, M Lopes, Y Saiman, MS Kim, C Petucci, CD Allis, GD Wu, BA Garcia. 2022.
Stable isotope tracing in vivo reveals a metabolic bridge linking the microbiota to host histone acetylation.
Cell Reports 41: 111809.

Zeng X, X Xing, M Gupta, FC Keber, JG Lopez, Y-CJ Lee, A Roichman, L Wang, MD Neinast, MS Donia, M Wühr, C Jang, JD Rabinowitz. 2022.
Gut bacterial nutrient preferences quantified in vivo.
Cell 185: 3441–3456.

Chellappa K, MR McReynolds, W Lu, X Zeng, M Makarov, F Hayat, S Mukherjee, YR Bhat, SR Lingala, RT Shima, HC Descamps, T Cox, L Ji, C Jankowski, Q Chu, SM Davidson, CA Thaiss, ME Migaud, JD Rabinowitz, JA Baur. 2022.
NAD precursors cycle between host tissues and the gut microbiome.
Cell Metabolism 34: 1947-1959.

Vesamäki JS, R Nissinen, MJ Kainz, M Pilecky, M Tiirola, SJ Taipale. 2022.
Decomposition rate and biochemical fate of carbon from natural polymers and microplastics in boreal lakes.
Frontiers in Microbiology 13: 1041242.

Nelson TF, R Baumgartner, M Jaggi, SM Bernasconi, G Battagliarin, C Sinkel, A Künkel, H-P E Kohler, K McNeill, M Sander. 2022.
Biodegradation of poly(butylene succinate) in soil laboratory incubations assessed by stable carbon isotope labelling.
NATURE Communications 13: 5691.

Fu Y, Y Luo, C Tang, Y Li, G Guggenberger, J Xu. 2022.
Microbial utilization of simple and complex carbon compounds in a temperate forest soil.
Soil Biology and Biochemistry 173: 108785.

Martinović T, T Mašínová, R López-Mondéjar, J Jansa, M Štursová, R Starke, P Baldrian. 2022.
Succession of the soil bacterial community as resource utilization shifts from plant residues to rhizodeposits.
Soil Biology and Biochemistry 173: 108786.

Kasimir M, M Behrens, H-U Humpf. 2022.
Release of small phenolic metabolites from isotopically labeled 13C lignin in the pig cecum model.
Journal of Agricultural and Food Chemistry 70: 8317–8325.

Miao Y, J Li, Y Li, Y Niu, T He, D Liu, W Ding. 2022.
Long-term compost amendment spurs cellulose decomposition by driving shifts in fungal community composition and promoting fungal diversity and phylogenetic relatedness.
mBio 13: e00323-22.

Conlon BH, D O’Tuama, A Michelsen, AJJ Crumière, JZ Shik. 2022.
A fungal symbiont converts provisioned cellulose into edible yield for its leafcutter ant farmers.
Biological Letters 18: 20220022.

Miao Y, Y Lin, Z Chen, H Zheng, Y Niu, Y Kuzyakov, D Liu, W Ding. 2022.
Fungal key players of cellulose utilization: Microbial networks in aggregates of long-term fertilized soils disentangled using 13C-DNA-stable isotope probing.
Science of the Total Environment 832: 155051.

Cai G. 2022.
Microbial process in organic matter stabilization in agricultural soil.
PhD Thesis. University of Hannover.

Shu X, Y Zou, LJ Shaw, L Todman, M Tibbett, T Sizmur. 2022.
Applying cover crop residues as diverse mixtures increases initial microbial assimilation of crop residue-derived carbon.
European Journal of Soil Science 73: e13232.

Kirui A, W Zhao, F Deligey, H Yang, X Kang, F Mentink-Vigier, T Wang. 2022.
Carbohydrate-aromatic interface and molecular architecture of lignocellulose.
NATURE Communications 13: 538.

Rontani J-F, B Charrière, D Aubert, C Menniti, F Vaultier1, C Aubert. 2022.
EIMS fragmentation and MRM quantification of ferulic and p-coumaric acid TMS derivatives in deposited atmospheric particles.
Rapid Communications in Mass Spectrometry 36: e9287.

Poulsen JS, N de Jonge, WV Macêdo, FR Dalby, A Feilberg, JL Nielsen. 2022.
Characterisation of cellulose-degrading organisms in an anaerobic digester.
Bioresource Technology 351: 126933.

Dang C, JGV Walkup, BA Hungate, RB Franklin, E Schwartz, EM Morrissey. 2022.
Phylogenetic organization in the assimilation of chemically distinct substrates by soil bacteria.
Environmental Microbiology 24: 357–369.

Yang J., M Han, Z Zhao, H Jiang. 2022.
Positive priming effects induced by allochthonous and autochthonous organic matter input in the lake sediments with different salinity.
Geophysical Research Letters 49: e2021GL096133.

Van Trijp MPH. 2022.
Studies on non-digestible carbohydrates in the human intestine – Focus on kinetics of fermentation and degradation.
PhD Thesis. Wageningen University.

Shekar SC, W Zhao, LD Fernando, I Hung, T Wang. 2022.
A three-dimensional 13C-13C-13C correlation experiment for high-resolution analysis of complex carbohydrates using solid-state NMR.
Journal of Magnetic Resonance 336: 107148.

Pfeifer L, G van Erven, EA Sinclair, CM Duarte, MA Kabel, B Classen. 2022.
Profiling the cell walls of seagrasses from A (Amphibolis) to Z (Zostera).
BMC Plant Biology 22: 63.

Yuan S, MV Tyufekchiev. MT Timko, K Schmidt-Rohr. 2022.
Direct quantification of the degree of polymerization of hydrolyzed cellulose by solid-state NMR spectroscopy.
Cellulose 29: 2131–2144.

Tanilas K, T Kriščiunaite. 2022.
Development of LC-MS-ESI-TOF method for quantification of phytates in food using 13C-labelled maize as internal standard.
Analytical and Bioanalytical Chemistry 414: 1539–1552.

Verbrigghe N, K Meeran, M Bahn, L Fuchslueger, IA Janssens, A Richter, BD Sigurdsson, JL Soong, S Vicca. 2022.
Negative priming of soil organic matter following long-term in situ warming of sub-arctic soils.
Geoderma 410: 115652.

Liu L, M Estiarte, P Bengtson, J Li, D Asensio, H Wallander, J Peñuelas. 2022.
Drought legacies on soil respiration and microbial community in a Mediterranean forest soil under different soil moisture and carbon inputs.
Geoderma 405: 115425.

Duran K, M van den Dikkenberg, G van Erven, JJP Baars, RNJ Comans, TW Kuyper, MA Kabel. 2022.
Microbial lignin degradation in an industrial composting environment.
Bioresource Technology Reports 17: 100911.

Moxley-Paquette V, B Wu, D Lane, M Bastawrous, P Ning, R Soong, P De Castro, I Kovacevic, T Frei, J Stuessi, D Al Adwan-Stojilkovic, S Graf, F Vincent, D Schmidig, T Kuehn, R Kuemmerle, A Beck, M Fey, W Bermel, F Busse, M Gundy, H Boenisch, H Heumann, B Nashman, R Dutta Majumdar, A Lacerda, AJ Simpson. 2022.
Evaluation of double-tuned single-sided planar microcoils for the analysis of small 13C enriched biological samples using 1H-13C 2D heteronuclear correlation NMR spectroscopy.
Magnetic Resonance in Chemistry 60: 386397.

Wei W. 2021.
Dietary inulin ameliorates non-alcoholic steatohepatitis through direct modulating gut microbiota and metabolitesetabolites.
PhD Thesis. The Chinese University of Hong Kong.

Poulhazan A, MC Dickwella Widanage, A Muszynski, AA Arnold, DE Warschawski, P Azadi, I Marcotte, T Wang. 2021.
Identification and quantification of glycans in whole cells: Architecture of microalgal polysaccharides described by solid-state nuclear magnetic resonance.
Journal of the American Chemical Society 143: 19374−19388.

Ning YP. 2021.
The development and application of environmental Comprehensive Multiphase Nuclear Magnetic Resonance Spectroscopy.
PhD Thesis. University of Toronto.

Raczka NC. 2021.
Mycorrhizal type dictates soil microbial diversity and function and the integrated root-microbial response to water stress in temperate forests.
PhD Thesis. West Virginia University.

Cresswell R, R Dupree, SP Brown, CS Pereira, MS Skaf, M Sorieul, P Dupree, S Hill. 2021.
Importance of water in maintaining softwood secondary cell wall nanostructure.
Biomacromolecules 22: 4669–4680.

Hellequin E, F Binet, O Klarzynski, S Hallin, J Juhanson, V Daburon, C Monard. 2021.
Shaping of soil microbial communities by plants does not translate into specific legacy effects on organic carbon mineralization.
Soil Biology and Biochemistry: 108449.

Tu H, D Ma, Y Luo, S Tang, Y Li, G Chen, L Wang, Z Hou, C Shen, H Lu, X Zhuang, L Zhang. 2021.
Quercetin alleviates chronic renal failure by targeting the PI3k/Akt pathway.
Bioengineered 12: 6538-6558.

Frossard A, L De Maeyer, M Adamczyk, M Svenning, E Verleyen, B Frey. 2021.
Microbial carbon use and associated changes in microbial community structure in high-Arctic tundra soils under elevated temperature.
Soil Biology and Biochemistry 162: 108419.

Liebmann, P. 2021.
Retention and stabilization of organic matter in forest subsoils.
PhD Thesis. Gottfried Wilhelm Leibniz University.

Raczka N, J Piñeiro, MM Tfaily, MS Lipton, RK Chu, L Pasa-Tolic, E Morrissey, E Brzostek. 2021.
Interactions between microbial diversity and substrate chemistry determine the fate of carbon in soil.
NATURE – Scientific Reports 11: 19320.

Lund PJ, LA Gates, M Leboeuf, SA Smith, L Chau, ES Friedman, M Lopes, Y Saiman, MS Kim, C Petucci, CD Allis, GD Wu, BA Garcia. 2021.
Stable Isotope Tracing in vivo reveals a metabolic bridge linking the microbiota to host histone acetylation.
Cell Reports 41: 111809.

Deroover L, JF Vázquez-Castellanos, G Vandermeulen, A Luypaerts, J Raes, CM Courtin, K Verbeke. 2021.
Wheat bran with reduced particle size increases serum SCFAs in obese subjects without improving health parameters compared with a maltodextrin placebo.
The American Journal of Clinical Nutrition 114: 1328–1341.

Deng P, T Valentino, MD Flythe, HNB Moseley, JR Leachman, AJ Morris, B Hennig. 2021.
Untargeted stable isotope probing of the gut microbiota metabolome using 13C-labeled dietary fibers.
Journal of Proteome Research 20: 2904-2913.

Preusser S, P Liebmann, A Stucke, J Wirsching, K Müller, R Mikutta, G Guggenberger, A Don, K Kalbitz, J Bachmann, S Marhan, C Poll, E Kandeler. 2021.
Microbial utilisation of aboveground litter-derived organic carbon within a sandy dystric cambisol profile.
Frontiers in Soil Science 1: 666950.

Dumond L, PY Lam, G van Erven, M Kabel, F Mounet, J Grima-Pettenati, Y Tobimatsu, G Hernandez-Raquet. 2021.
Termite gut microbiota contribution to wheat straw delignification in anaerobic bioreactors.
ACS Sustainable Chemistry & Engineering 9: 2191-2202.

Lin Y, AN Campbell, A Bhattacharyya, N DiDonato, AM Thompson, MM Tfaily, PS Nico, WL Silver, J Pett-Ridge. 2021.
Differential effects of redox conditions on the decomposition of litter and soil organic matter.
Biogeochemistry 154: 1-15.

Chen X, , M Jin, P Duan, J Mejia, W Chu, X Ye, X Cao, K Schmidt-Rohr, ML Thompson, H Gao, J Mao. 2021.
Structural composition of immobilized fertilizer N associated with decomposed wheat straw residues using advanced nuclear magnetic resonance spectroscopy combined with 13C and 15N labeling.
Geoderma 398: 115110.

Dell’Orco S. 2021.
Thermochemical biorefineries for the conversion of lignocellulosic biomass: improvements of fast pyrolysis and hydrothermal processes for fuels and chemicals precursors.
PhD Thesis. University of Florence.

Miao Y, Y Niu, R Luo, Y Li, H Zheng, Y Kuzyakov, Z Chen, D Liu, W Ding. 2021.
Lower microbial carbon use efficiency reduces cellulose-derived carbon retention in soils amended with compost versus mineral fertilizers.
Soil Biology and Biochemistry: 108227.

Happs RM, B Addison, C Doeppke, BS Donohoe, MF Davis, AE Harman-Ware. 2021.
Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass.
Biotechnology for Biofuels 14: 58.

Wordell-Dietrich P. 2021.
Stability of soil organic carbon in the subsoil.
PhD Thesis. Gottfried Wilhelm Leibniz University Hannover.

Neubauer D, O Kolmakova, J Woodhouse, R Taube, K Mangelsdorf, M Gladyshev, K Premke, H-P Grossart. 2021.
Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter.
NATURE – The ISME Journal 15: 1735–1750.

López-Mondéjar R, V Tlăskál, T Vĕtrovský, M Štursová, R Toscan, U Nunes da Rocha, P Baldrian. 2020.
Metagenomics and stable isotope probing reveal the complementary contribution of fungal and bacterial communities in the recycling of dead biomass in forest soil.
Soil Biology and Biochemistry 148: 107875.

Wordell-Dietrich P, A Wotte, J Rethemeyer, J Bachmann, M Helfrich, K Kirfel, C Leuschner, A Don. 2020.
Vertical partitioning of CO2 production in a forest soil.
Biogeosciences 17: 6341–6356.

Yu J, MJ Pavia, LM Deem, SE Crow, JL Deenik, CR Penton. 2020.
DNA-Stable isotope probing shotgun metagenomics reveals the resilience of active microbial communities to biochar amendment in oxisol soil.
Frontiers in Microbiology 11: 587972.

Hilgers R, G van Erven, V Boerkamp, I Sulaev, A Potthast, MA Kabel, J-P Vincken. 2020.
Understanding laccase/HBT-catalyzed grass delignification at the molecular level.
Green Chemistry 22: 1735-1746.

Van Erven G, AF Kleijn, A Patyshakuliyeva, M Di Falco, A Tsang, RP de Vries, WJH van Berkel, MA Kabel. 2020.
Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina.
Biotechnology for Biofuels 13: 75.

Robertson TM, JE Brown, BA Fielding, R Hovorka, MD Robertson. 2020.
Resistant starch production and glucose release from pre-prepared chilled food: The SPUD Project.
Nutrition Bulletin 46: 52–59.

Carrier M, R Fournet, B Sirjean, S Amsbury, Y Benitez-Alfonso, P-Y Pontalier, AV Bridgwater. 2020.
Fast pyrolysis of hemicelluloses into short-chain acids: An investigation on concerted mechanisms.
Energy & Fuels 34: 14232–14248.

Shridar B. 2020.
Microbes in the limelight: liming alters microbial communities, reducing decomposition in northern hardwood forest soils.
PhD Thesis. Cornell University.

Hellequin E, C Monard, M Chorin, N Le bris, V Daburon, O Klarzynski, F Binet. 2020.
Responses of active soil microorganisms facing to a soil biostimulant input compared to plant legacy effects.
NATURE – Scientific Reports 10: 13727.

Mason-Jones K, P Vrehen, K Koper, J Wang, WH van der Putten, GF Veen. 2020.
Short-term temperature history affects mineralization of fresh litter and extant soil organic matter, irrespective of agricultural management.
Soil Biology and Biochemistry 150: 107985.

Kaleda A, K Talvistu, M Tamm, M Viirma, J Rosend, K Tanilas, M Kriisa, N Part, M-L Tammik. 2020.
Impact of fermentation and phytase treatment of pea-oat protein blend on physicochemical, sensory, and nutritional properties of extruded meat analogs.
Foods 9: 1059.

Ogata EM. 2020.
Anthropogenic influences on bacterial assemblages in stream anthropogenic influences on bacterial assemblages in stream biofilms.
PhD Thesis. Utah State University.

McBride SG, M Choudoir, N Fierer, M Strickland L. 2020.
Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics.
Ecology 101: e03130.

Fernández-del-Río L, E Soubeyrand, GJ Basset, CF Clarke. 2020.
Metabolism of the flavonol kaempferol in kidney cells liberates the B-ring to enter coenzyme Q biosynthesis.
Molecules 25: 2955.

Liebmann P, P Wordell-Dietrich, K Kalbitz, R Mikutta, F Kalks, A Don, SK Woche, LR Dsilva, G Guggenberger. 2020.
Relevance of aboveground litter for soil organic matter formation – a soil profile perspective.
Biogeosciences 17: 3099 – 3113.

Gázquez A, MT Prieto-Sánchez, JE Blanco-Carnero, M Ruíz-Palacios, A Nieto, D van Harskamp, JE Oosterink, H Schierbeek, JB van Goudoever, H Demmelmair, B Koletzko, E Larqué. 2020.
Altered materno-fetal transfer of 13C-polyunsaturated fatty acids in obese pregnant women.
Clinical Nutrition 39: 1101-1107.

Pegoraro EF. 2020.
Partitioning sources of soil respiration in thawing permafrost using carbon isotopes.
PhD Thesis. Northern Arizona University.

Yu J. 2020.
Characterization of tropical agricultural soil microbiomes after biochar amendment.
PhD Thesis. Arizona State University.

Fielding B, B Griffin, W Hall, L Hodson, R Antoni, A Umpleby, T Robertson, T Preston, M Brook, K Pinnick. 2020.
Report of a member-led meeting: How stable isotope techniques can enhance human nutrition research.
Proceedings of the Nutrition Society 79: 373-379.

Havlik J, V Marinello, A Gardyne, M Hou, W Mullen, DJ Morrison, T Preston, E Combet, CA Edwards. 2020.
Dietary fibres differentially impact on the production of phenolic acids from rutin in an in vitro fermentation model of the human gut microbiota.
Nutrients 12: 1577.

Najera F. 2020.
Effect of drying and rewetting and freezing and thawing cycles on soil carbon sequestration in a humid temperate forest soil: underlying mechanisms.
PhD Thesis. Universidad de la Frontera.

Najera F, MA Dippold, J Boy, O Seguel, M Koester, S Stock, C Merino, Y Kuzyakov, F Matus. 2020.
Effects of drying/rewetting on soil aggregate dynamics and implications for organic matter turnover.
Biology and Fertility of Soils 56: 893–905.

Van Erven G. 2020.
Quantitative mapping of lignin – Comprehensive insight into fungal delignification of plant biomass.
PhD Thesis. Wageningen University.

Kalks F, P Liebmann, P Wordell-Dietrich, G Guggenberger, K Kalbitz, R Mikutta, M Helfrich, A Don. 2020.
Fate and stability of dissolved organic carbon in topsoils and subsoils under beech forests.
Biogeochemistry 148: 111–128.

Chen X, X Ye, W Chu, DC Olk, X Cao, K Schmidt-Rohr, L Zhang, ML Thompson, J Mao, H Gao. 2020.
Formation of char-like, fused-ring aromatic structures from a nonpyrogenic pathway during decomposition of wheat straw.
Journal of Agricultural and Food Chemistry 68: 2607-2614.

Mukarakate C, K Orton, Y Kim, S Dell’Orco, CA Farberow, S Kim, MJ Watson, RM Baldwin, KA Magrini. 2020.
Isotopic studies for tracking biogenic carbon during co-processing of biomass and vacuum gas oil.
ACS Sustainable Chemistry & Engineering 8: 2652-2664.

Liles MR, Kloepper J. 2020.
Use of pectin or pectin-related saccharides to enhance efficacy of plant growth-promoting rhizobacteria (pgpr) strains for promoting growth and health in plants and animals.
United States Patent Application 20200009200 A1.

Moore JAM, BN Sulman, MA Mayes, CM Patterson, AT Classen. 2020.
Plant roots stimulate the decomposition of complex, but not simple, soil carbon.
Functional Ecology 34: 899–910.

Vieira S, J Sikorski, A Gebala, RS Boeddinghaus, S Marhan, T Rennert, E Kandeler, J Overmann. 2020.
Bacterial colonization of minerals in grassland soils is selective and highly dynamic.
Environmental Microbiology 22: 917–933.

Koechli C, AN Campbell, C Pepe-Ranney, DH Buckley. 2019.
Assessing fungal contributions to cellulose degradation in soil by using high-throughput stable isotope probing.
Soil Biology and Biochemistry 130: 150-158.

Pegoraro E, M Mauritz, R Bracho, C Ebert, P Dijkstra, BA Hungate, KT Konstantinidis, Y Luo, C Schädel, JM Tiedje, J Zhou, EAG Schuur. 2019.
Glucose addition increases the magnitude and decreases the age of soil respired carbon in a long-term permafrost incubation study.
Soil Biology and Biochemistry 129: 201-211.

Lemmel F. 2019.
Diversités taxonomique et fonctionnelle des communautés microbiennes en lien avec le cycle du carbone dans un gradient de sols multi-contaminés.
PhD Thesis. Université de Lorraine.

Siles JA, T Cajthaml, J Frouz, R Margesin. 2019.
Assessment of soil microbial communities involved in cellulose utilization at two contrasting Alpine forest sites.
Soil Biology and Biochemistry 129: 13-16.

Schlicker L, HM Boers, CA Dudek, G Zhao, A Barua, JP Trezzi, M Meyer-Hermann, DM Jacobs, K Hiller. 2019.
Postprandial metabolic effects of fiber mixes revealed by in vivo stable isotope labeling in humans.
Metabolites 9: 91.

Li Z, Q Yao, X Guo, A Crits-Christoph, MA Mayes, W Judson Hervey IV, SL Lebeis, JF Banfield, GB Hurst, RL Hettich, C Pan. 2019.
Genome-resolved proteomic Stable Isotope Probing of soil microbial communities using 13CO2 and 13C-methanol.
Frontiers in Microbiology 15: 2706.

Terrett OM, JJ Lyczakowski, L Yu, D Luga, WT Franks, SP Brown, R Dupree, P Dupree. 2019.
Molecular architecture of softwood revealed by solid-state NMR.
NATURE Communications 10: 4978.

Fernández-Calleja JMS, LMS Bouwman, HJM Swarts, A Oosting, J Keijer, EM van Schothorst. 2019.
Extended indirect calorimetry with isotopic CO2 sensors for prolonged and continuous quantification of exogenous vs. total substrate oxidation in mice.
NATURE – Scientific Reports 9: 11507.

Fernández-Calleja JMS. 2019.
Extended indirect calorimetry as a physiological phenotyping tool in mouse nutritional intervention studies, with a focus on metabolic programming by starches.
PhD Thesis. Wageningen University.

Nayan N, G van Erven, MA Kabel, ASM Sonnenberg, WH Hendriks, JW Cone. 2019.
Evaluation of fungal degradation of wheat straw cell wall using different analytical methods from ruminant nutrition perspective.
Journal of the Science of Food and Agriculture 99: 4054–4062.

Coonan EC, CA Kirkby, JA Kirkegaard, MR Amidy, CL Strong, AE Richardson. 2019.
Lime and nutrient addition affects the dynamics and fractions of soil carbon in a short-term incubation study with 13C-labeled wheat straw.
Soil Science 184: 43–51.

Van Erven G, R de Visser, P de Waard, WJH van Berkel, MA Kabel. 2019.
Uniformly 13C labeled lignin internal standards for quantitative pyrolysis−GC−MS analysis of grass and wood.
ACS Sustainable Chemistry & Engineering 7: 20070−20076.

Van Erven G, R Hilgers, P de Waard, E-J Gladbeek, WJH van Berkel, MA Kabel. 2019.
Elucidation of in situ ligninolysis mechanisms of the selective white-rot fungus Ceriporiopsis subvermispora.
ACS Sustainable Chemistry & Engineering 7: 16757−16764.

Van Erven G, J Wang, P Sun, P de Waard, J van der Putten, GE Frissen, RJA Gosselink, G Zinovyev, A Potthast, WJH van Berkel, MA Kabel. 2019.
Structural motifs of wheat straw lignin differ in susceptibility to degradation by the white-rot fungus Ceriporiopsis subvermispora.
ACS Sustainable Chemistry & Engineering 7: 20032−20042.

Tsugawa H. 2019.
Interpretation of MS/MS spectra and structure estimation of natural products (in Japanese).
CICSJ Bulletin 37: 45-50.

Fernández-Calleja JMS, LMS Bouwman, HJM Swarts, N Billecke, A Oosting, J Keijer, EM van Schothorst. 2019.
A lowly digestible-starch diet after weaning enhances exogenous glucose oxidation rate in female, but not in male, mice.
Nutrients 11: 2242.

Weis S, S Schnell, M Egert. 2019.
RNA-Based Stable Isotope Probing (RNA-SIP) in the gut environment.
In: Dumont MG, M Hernández García, eds. Stable Isotope Probing – Methods and Protocols. Methods in Molecular Biology vol. 2046. Humana, New York, NY.

Preusser S, C Poll, S Marhan, G Angst, CW Mueller, J Bachmann, E Kandeler. 2019.
Fungi and bacteria respond differently to changing environmental conditions within a soil profile.
Soil Biology and Biochemistry 137: 107543.

Kandeler E, A Gebala, RS Boeddinghaus, K Müller, T Rennert, M Soares, J Rousk, S Marhan S. 2019.
The mineralosphere – Succession and physiology of bacteria and fungicolonising pristine minerals in grassland soils under different land-use intensities.
Soil Biology and Biochemistry 136: 107534.

Wieczorek AS, O Schmidt, A Chatzinotas, M von Bergen, A Gorissen, S Kolb. 2019.
Ecological functions of agricultural soil bacteria and microeukaryotes in chitin degradation – a case study.
Frontiers in Microbiology 10: 1293.

Graeber D, B Gücker, R Wild, NS Wells, C Anlanger, N Kamjunke, H Norf, C Schmidt, M Brauns. 2019.
Biofilm-specific uptake does not explain differences in whole-stream DOC tracer uptake between a forest and an agricultural stream.
Biogeochemistry 144: 85–101.

Vlahakis C, J Hazebroek, C Beecher, F de Jong. 2019.
Isotopic ratio outlier analysis improves metabolomics prediction of nitrogen treatment in maize.
Phytochemistry 164: 130-135.

Gázquez A, MT Prieto-Sánchez, JE Blanco-Carnero, D van Harskamp, S Perazzolo, JE Oosterink, H Demmelmair, H Schierbeek, BG Sengers, RM Lewis, JB van Goudoever, B Koletzko, E Larqué. 2019.
In vivo kinetic study of materno-fetal fatty acid transfer in obese and normal weight pregnant women.
The Journal of Physiology 597: 4959–4973.

Dvergedal H, J Ødegård, M Øverland, LT Mydland, G Klemetsdal. 2019.
Selection for feed efficiency in Atlantic salmon using individual indicator traits based on stable isotope profiling.
Genetics Selection Evolution 51: 13.

Tsugawa H, R Nakabayashi, T Mori, Y Yamada, M Takahashi, A Rai, R Sugiyama, H Yamamoto, T Nakaya, M Yamazaki, R Kooke, JA Bac-Molenaar, N Oztolan-Erol, JJB Keurentjes, M Arita , K Saito. 2019.
A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms.
NATURE Methods 16: 295-298.

Taubert M, J Stähly, S Kolb, K Küsel. 2019.
Divergent microbial communities in groundwater and overlying soils exhibit functional redundancy for plant-polysaccharide degradation.
PLoS ONE 14: e0212937.

Azzout-Marniche D, C Chaumontet, J Piedcoq, N Khodorova, G Fromentin, D Tomé, C Gaudichon, PC Even. 2019.
High pancreatic amylase expression promotes adiposity in obesity-prone carbohydrate-sensitive rats.
The Journal of Nutrition 149: 270-279.

Kang X, A Kirui, MC Dickwella Widanage, F Mentink-Vigier, DJ Cosgrove, T Wang. 2019.
Lignin-polysaccharide interactions in plant secondary cell walls revealed by solid-state NMR.
NATURE Communications 10: 347.

Kaplan H, S Ratering, P Felix-Henningsen, S Schnell. 2019.
Stability of in situ immobilization of trace metals with different amendments revealed by microbial 13C-labelled wheat root decomposition and efflux-mediated metal resistance of soil bacteria.
Science of The Total Environment 659: 1082-1089.

Moreno JL, IF Torres, C García, R López-Mondéjar, F Bastida. 2019.
Land use shapes the resistance of the soil microbial community and the C cycling response to drought in a semi-arid area.
Science of The Total Environment 648: 1018-1030.

Wild B, J Li, J Pihlblad, P Bengtson, T Rütting. 2019.
Decoupling of priming and microbial N mining during a short-term soil incubation.
Soil Biology and Biochemistry 129: 71-79.

Hicks LC, P Meir, AT Nottingham, DS Reay, AW Stott, N Salinas, J Whitaker. 2019.
Carbon and nitrogen inputs differentially affect priming of soil organic matter in tropical lowland and montane soils.
Soil Biology and Biochemistry 129: 212-222.

Miller RN. 2018.
Quantitative assessment of bacterial and fungal degradation of glucose and cellulose.
MsC Thesis. West Virginia University.

Maarastawi SA, Frindte K, Geer R, Kröber E, Knief C. 2018.
Temporal dynamics and compartment specific rice straw degradation in bulk soil and the rhizosphere of maize.
Soil Biology and Biochemistry 127: 200-212.

Van Erven G, N Nayan, ASM Sonnenberg, WH Hendriks, JW Cone, MA Kabel. 2018.
Mechanistic insight in the selective delignification of wheat straw by three white-rot fungal species through quantitative 13C-IS py-GC–MS and whole cell wall HSQC NMR.
Biotechnology for Biofuels 11: 262.

Pinta MN, I Montoliu, A-M Aura, T Seppänen-Laakso, D Barron, S Moco. 2018.
In vitro gut metabolism of [U-13C]-quinic acid, the other hydrolysis product of chlorogenic acid.
Molecular Nutrition & Food Research 62: 1800396.

De Bruin HM. 2018.
Slowing starch digestibility in foods: Formulation, substantiation and metabolic effects related to health.
PhD Thesis. University of Groningen.

Di Lonardo DP, M Manrubi, W de Boer, H Zweers, GF Veen, A Van der Wal. 2018.
Relationship between home-field advantage of litter decomposition and priming of soil organic matter.
Soil Biology and Biochemistry 126: 49–56.

Ning P, R Soong, W Bermel, D Lane, MJ Simpson, AJ Simpson. 2018.
13C quantification in heterogeneous multiphase natural samples by CMP-NMR using stepped decoupling.
Analytical and Bioanalytical Chemistry 410: 7055–7065.

Kang X, A Kirui, A Muszyński, MC Dickwella Widanage, A Chen, P Azadi, P Wang, F Mentink-Vigier, T Wang. 2018.
Molecular architecture of fungal cell walls revealed by solid-state NMR.
NATURE Communications 9: 2747.

Wieczorek A. 2018.
Trophic interactions of a chitin-degrading microbiome of an aerated agricultural soil.
PhD Thesis. University of Bayreuth.

Beek, van der CM, EE Canfora, AM Kip, SHM Gorissen, SWM Olde Damink, HM van Eijk, JJ Holst, EE Blaak, CHC Dejong, K Lenaerts. 2018.
The prebiotic inulin improves substrate metabolism and promotes short-chain fatty acid production in overweight to obese men.
Metabolism Clinical and  Experimental 87: 25-35.

Egert M, S Weis, S Schnell. 2018.
RNA-based stable isotope probing (RNA-SIP) to unravel intestinal host-microbe Interactions.
Methods 149: 25-30.

Aye NS, CR Butterly, PWG Sale, C Tang. 2018.
Interactive effects of initial pH and nitrogen status on soil organic carbon priming by glucose and lignocellulose.
Soil Biology and Biochemistry 123: 33-44.

Heijboer A. 2018.
Disentangling microbial decomposition networks – Linking detritus-based soil microbial food webs to ecosystem processes.
PhD Thesis. Wageningen University.

Leinemann T. 2018.
Origin and fate of dissolved organic matter in the subsoil.
PhD Thesis. Leibniz University of Hannover.

Cao X, K Schmidt-Rohr. 2018.
Abundant nonprotonated aromatic and oxygen-bonded carbons make humic substances distinct from biopolymers.
Environmental Science and Technology Letters 5: 476-480.

López-Mondéjar R, V Brabcová, M Štursová, A Davidová, J Jansa, T Cajthaml, P Baldrian. 2018.
Decomposer food web in a deciduous forest shows high share of generalist microorganisms and importance of microbial biomass recycling.
NATURE – The ISME Journal 12: 1768–1778.

Herrmann E, W Young, V Reichert-Grimm, S Weis, CU Riedel, D Rosendale, H Stoklosinski, M Hunt, M Egert. 2018.
In vivo assessment of resistant starch degradation by the caecal microbiota of mice using RNA-based Stable Isotope Probing—A proof-of-principle study.
Nutrients 10: 179.

Leinemann T, S Preusser, R Mikutta, K Kalbitz, C Cerli, C Höschen, CW Mueller, E Kandeler, G Guggenberger. 2018.
Multiple exchange processes on mineral surfaces control the transport of dissolved organic matter through soil profiles.
Soil Biology and Biochemistry 118: 79–90.

Trevathan-Tackett SM, ACG Thomson, PJ Ralph, PI Macreadie. 2018.
Fresh carbon inputs to seagrass sediments induce variable microbial priming responses.
Science of the Total Environment 621: 663–669.

Beek, van der CM. 2017.
The gut in control of health and disease: unraveling the role of short-chain fatty acids in human metabolism.
PhD Thesis. Maastricht University.

Segura JH, MB Nilsson, M Haei, T Sparrman, JP Mikkola, J Gräsvik, J Schleucher, MG Öquist. 2017.
Microbial mineralization of cellulose in frozen soils.
NATURE Communications 8: 1154.

Boers HM, TH van Dijk, H Hiemstra, A-R Hoogenraad, DJ Mela, HPF Peters, RJ Vonk, MG Priebe. 2017.
Effect of fibre additions to flatbread flour mixes on glucose kinetics: a randomised controlled trial.
British Journal of Nutrition 118: 777-787.

Wagner K, MM Bengtsson, RH Findlay, TJ Battin, AJ Ulseth. 2017.
High light intensity mediates a shift from allochthonous to autochthonous carbon use in phototrophic stream biofilms.
Journal of Geophysical Research: Biogeosciences 122: 1806–1820.

Alonso-Pernas P, S Bartram, EM Arias-Cordero, AL Novoselov, L Halty-deLeon, Y Shao, W Boland. 2017.
In vivo isotopic labeling of symbiotic bacteria involved in cellulose degradation and nitrogen recycling within the gut of the forest cockchafer (Melolontha hippocastani).
Frontiers in Microbiology 10: 1970.

Herzog CP. 2017.
Growth and decay of Scots pine roots.
PhD Thesis. ETH Zürich.

Van Erven G, R de Visser, DWH Merkx, W Strolenberg, P de Gijsel, H Gruppen, MA Kabel. 2017.
Quantification of lignin and its structural features in plant biomass using 13C lignin as internal standard for pyrolysis-GC-SIM-MS.
Analytical Chemistry 89: 10907–10916.

Mäkelä A, U Witte, P Archambault. 2017.
Benthic macroinfaunal community structure, resource utilisation and trophic relationships in two Canadian Arctic Archipelago polynyas.
PLoS ONE 12(8): e0183034.

Müller K, S Marhan, E Kandeler, C Poll. 2017.
Carbon flow from litter through soil microorganisms: From incorporation rates to mean residence times in bacteria and fungi.
Soil Biology and Biochemistry 115: 187-196.

Wilhelm RC, E Cardenas, H Leung, K Maas, M Hartmann, A Hahn, S Hallam, WW Mohn. 2017.
Data Descriptor: A metagenomics survey of forest soil microbial communities more than a decade after timber harvesting.
NATURE Scientific Data 4: 170092.

Herrmann E, W Young, D Rosendale, R Conrad, CU Riedel, M Egert. 2017.
Determination of resistant starch assimilating bacteria in fecal samples of mice by in vitro RNA-based Stable Isotope Probing.
Frontiers in Microbiology 8: 1331.

Mäkelä A, U Witte, P Archambault. 2017.
Ice algae versus phytoplankton: resource utilization by Arctic deep sea macroinfauna revealed through isotope labelling experiments.
Marine Ecology Progress Papers 572: 1–18.

Fortier-McGill B, RD Majumdar, L Lam, R Soong, YL Mobarhan, A Sutrisno, R de Visser, MJ Simpson, H Wheeler, M Campbell, A Gorissen, AJ Simpson. 2017.
Comprehensive multiphase (CMP) NMR monitoring of the structural changes and molecular flux within a growing seed.
Journal of Agricultural and Food Chemistry: 65: 6779–6788.

Carrier M, M Windt, B Ziegler, J Appelt, B Saake, D Meier, A Bridgwater. 2017.
Quantitative insights into the fast pyrolysis of extracted cellulose, hemicelluloses, and lignin.
ChemSusChem 10: 3212 –3224.

Bastida F, IF Torres, T Hernández, C García. 2017.
The impacts of organic amendments: Do they confer stability against drought on the soil microbial community?
Soil Biology and Biochemistry 113: 173-183.

Mulat DG, F Mosbæk, AJ Warda, D Polag, M Greule, F Keppler, JL Nielsen, A Feilberg. 2017.
Exogenous addition of H2 for an in situ biogas upgrading through biological reduction of carbon dioxide into methane.
Waste Management: 68: 146-156.

Fernández-del-Río L, A Nag, E Gutiérrez Casado, J Ariza, AM Awad, AI Joseph, O Kwon, E Verdin, R de Cabo, C Schneider, JZ Torres, MI Burón, CF Clarke, JM Villalba. 2017.
Kaempferol increases levels of coenzyme Q in kidney cells and serves as a biosynthetic ring precursor.
Free Radical Biology and Medicine: 110: 176-187.

Cheng L, N Zhang, M Yuan, J Xiao, Y Qin, Y Deng, Q Tu, K Xue, JD Van Nostrand, L Wu, Z He, X Zhou, MB Leigh, KT Konstantinidis, EAG Schuur, Y Luo, JM Tiedje, J Zhou. 2017.
Warming enhances old organic carbon decomposition through altering functional microbial communities.
NATURE – The ISME Journal 11: 18251835.

Wakerley DW, MF Kuehnel, KL Orchard, KH Ly, TE Rosser, E Reisner. 2017.
Solar-driven reforming of lignocellulose to H2 with a CdS/CdOx photocatalyst.
NATURE Energy 2: 17021.

Deroover L, J Verspreet, A Luypaerts, G Vandermeulen, CM Courtin, K Verbeke. 2017.
Wheat bran does not affect postprandial plasma short-chain fatty acids from 13C-inulin fermentation in healthy subjects.
Nutrients 9: 83.

Preusser S, S Marhan, C Poll, E Kandeler. 2017.
Microbial community response to changes in substrate availability and habitat conditions in a reciprocal subsoil transfer experiment.
Soil Biology and Biochemistry 105: 138-152.

Turner S, S Meyer-Stüve, A Schippers, G Guggenberger, F Schaarschmidt, B Wild, A Richter, R Dohrmann, R Mikutta. 2017.
Microbial utilization of mineral-associated nitrogen in soils.
Soil Biology and Biochemistry 104: 185-196.

Orgill SE, JR Condon, CA Kirkby, BA Orchard, MK Conyers, RSB Greene, BW Murphy. 2017.
Soil with high organic carbon concentration continues to sequester carbon with increasing carbon inputs.
Geoderma 285: 151-163.

Öquist MG, B Erhagen, M Haei, T Sparrman, U Ilstedt, J Schleucher, MB Nilsson. 2017.
The effect of temperature and substrate quality on the carbon use efficiency of saprotrophic decomposition.
Plant and Soil 414: 113–125.

Scherbl D, M. Renouf, C. Marmet, L. Poquet, I. Cristiani, S. Dahbane, S. Emady-Azar, J. Sauser, J. Galan, F. Dionisi, E. Richling. 2017.
Breakfast consumption induces retarded release of chlorogenic acid metabolites in humans.
European Food Research and Technology 243: 791-806.

Nakabayashi R, K Saito. 2017.
Ultrahigh resolution metabolomics for S-containing metabolites.
Current Opinion in Biotechnology 43: 8-16.

Guhr A. 2016.
Adaptions of saprotrophic filamentous fungi to drought stress in soils: Hydraulic redistribution through mycelia networks and transcriptional responses.
PhD Thesis. University of Bayreuth.

Zabela V, C Sampath, M Oufir, F Moradi-Afrapoli, V Butterweck, M Hamburger. 2016.
Pharmacokinetics of dietary kaempferol and its metabolite 4-hydroxyphenylacetic acid in rats.
Fitoterapia 115: 189-197.

Guhr A , C Marzini, W Borken, C Poll, E Matzner. 2016.
Effect of water redistribution by two distinct saprotrophic fungi on carbon mineralization and nitrogen translocation in dry soil.
Soil Biology and Biochemistry 103: 380-387.

Moradi-Afrapoli F, M Oufir, FR Walter, MA Deli, M Smiesko, V Zabela, V Butterwecke, M Hamburger. 2016.
Validation of UHPLC–MS/MS methods for the determination of kaempferol and its metabolite 4-hydroxyphenyl acetic acid, and application to in vitro blood-brain barrier and intestinal drug permeability studies.
Journal of Pharmaceutical and Biomedical Analysis 128: 264-274.

Heijboer A, HFM ten Berge, PC de Ruiter, H Bracht Jørgensen, GA Kowalchuk, J Bloem. 2016.
Plant biomass, soil microbial community structure and nitrogen cycling under different organic amendment regimes; a 15N tracer-based approach.
Applied Soil Ecology 107: 251-260.

Wild B, N Gentsch, P Čapek, K Diáková, RJ Eloy Alves, J Bárta, A Gittel, G Hugelius, A Knoltsch, P Kuhry, N Lashchinskiy, R Mikutta4, J Palmtag, C Schleper, J Schnecker, O Shibistova, M Takriti VL Torsvik, T Urich, M Watzka, H Šantrůčková, G Guggenberger, A Richter. 2016.
Plant-derived compounds stimulate the decomposition of organic matter in arctic permafrost soils.
NATURE – Scientific Reports 6 : 25607.

Ward ND, TS Bianchi, HO Sawakuchi, W Gagne-Maynard, AC Cunha, DC Brito, V Neu, A de Matos Valerio, R da Silva, AV Krusche, JE Richey, RG Keil. 2016.
The reactivity of plant-derived organic matter and the potential importance of priming effects along the lower Amazon River.
Journal of Geophysical Research 121: 1522-1539.

Kramer S, D Dibbern, J Moll, M Huenninghaus, R Koller, D Krueger, S Marhan, T Urich, T Wubet, M Bonkowski, F Buscot, T Lueders, E Kandeler. 2016.
Resource partitioning between bacteria, fungi and protists in the detritusphere of an agricultural soil.
Frontiers in Microbiology 7: 1524.

Doppler M, B Kluger, C Bueschl, C Schneider, R Krska, S Delcambre, K Hiller, M Lemmens, R Schuhmacher. 2016
Stable isotope-assisted evaluation of different extraction solvents for untargeted metabolomics of plants.
International Journal of Molecular Sciences 17: 1017.

Warren CR. 2016.
Simultaneous efflux and uptake of metabolites by roots of wheat.
Plant and Soil 406: 359–374.

Rime T, M Hartmann, B Stierli, AM Anesio, B Frey. 2016.
Assimilation of microbial and plant carbon by active prokaryotic and fungal populations in glacial forefields.
Soil Biology and Biochemistry 98: 30-41.

Lux G. 2016.
Einfluss organischer Düngung auf Ertrag, symbiotische N2-Fixierung und Nährstoffaufnahme von Saatplatterbse (Lathyrus sativus L.), Ackerbohne (Vicia faba L.) und Rotklee (Trifolium pratense L.) sowie auf Ertrag eines nachfolgenden Winterweizens (Triticum aestivum L.).
PhD Thesis. Humboldt University of Berlin.

Vetrovský T, M Štursová, P Baldrian. 2016.
Fungal communities in soils: Soil organic matter degradation.
Methods in Molecular Biology (Microbial Environmental Genomics (MEG)) 1399: 89-100.

Butts CA, G Paturi, MH Tavendale, D Hedderley, H Stoklosinski, T Herath, D Rosendale, N Roy, JA Monro, J Ansell. 2016.
The fate of 13C-labelled and non-labelled inulin predisposed to large bowel fermentation in rats.
Food and Function 7: 1825-1832.

Verbruggen E, J Jansa, EC Hammer, MC Rillig. 2016.
Do arbuscular mycorrhizal fungi stabilize litter-derived carbon in soil?
Journal of Ecology 104: 261-269.

Leung HTC, KR Maas, RC Wilhelm, WW Mohn. 2016.
Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils.
NATURE – The ISME Journal 10: 363-375.

Gontikaki E, B. Thornton, T Cornulier, U Witte. 2015.
Occurrence of priming in the degradation of lignocellulose in marine sediments.
PLoS ONE 10: e0143917.

Nakabayashi R, H Tsugawa, M Kitajima, H Takayama, K Saito. 2015.
Boosting sensitivity in liquid chromatography–Fourier transform ion cyclotron resonance–Tandem mass spectrometry for product ion analysis of monoterpene indole alkaloids.
Frontiers in Plant Science 6: 1127.

Guhr A, W Borken, M Spohn, E Matzner. 2015.
Redistribution of soil water by a saprotrophic fungus enhances carbon mineralization.
PNAS 112: 14647-14651.

Musacchi S, S Serra, M Noferini, F Gagliardi, D Bucci, G. Pagliuca, E Zironi. 2015.
Study of the relation between peach ripening and phenolic compounds.
Proc. VIIIth Intl. Peach Symposium (Xiloyannis C et al., eds). ISHS Acta Horticulturae 1084.

Read D, WE Huang, AS Whiteley. 2015.
Single Cell Microbial Ecophysiology with Raman-FISH.
Hydrocarbon and Lipid Microbiology Protocols (McGenity TJ et al., eds), Springer Protocols Handbooks, doi 10.1007/8623_2015_153.

Oberli M, A Marsset-Baglieri, G Airinei, V Santé-Lhoutellier, N Khodorova, D Rémond, A Foucault-Simonin, J Piedcoq, D Tomé, G Fromentin, R Benamouzig, C Gaudichon. 2015.
High true ileal digestibility but not postprandial utilization of nitrogen from bovine meat protein in humans is moderately decreased by high-temperature, long-duration cooking.
The Journal of Nutrition 145: 2221-2228.

Torres Bocero IF. 2015.
Dynamics of carbon in degraded semiarid soils: effects of organic amendments and associated soil microbial communities.
PhD Thesis. University of Murcia.

Eichorst SA, F Strasser, T Woyke, A Schintlmeister, M Wagner, D Woebken. 2015.
Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils.
FEMS Microbiology Ecology 91: fiv106.

Foston M, HL Trajano, R Samuel, CE Wyman, J He, AJ Ragauskas. 2015.
Recalcitrance and structural analysis by water-only flowthrough pretreatment of 13C enriched corn stover stem.
Bioresource Technology 197: 128-136.

De Jong F, C Beecher, M Akond, J Ericson, MA Babar. 2015.
Metabolic effect of drought stress during the grain filling growth stage in wheat measured by Isotopic Ratio Outlier Analysis(IROA).

Mulat DG, A Feilberg. 2015.
GC/MS method for determining carbon isotope enrichment and concentration of underivatized short-chain fatty acids by direct aqueous solution injection of biogas digester samples.
Talanta 143: 56-63.

Dupree R, TJ Simmons, J Mortimer, D Patel, D Iuga, SP Brown, P Dupree. 2015.
Probing the molecular architecture of Arabidopsis thaliana secondary cell walls using two- and three-dimensional 13C solid-state NMR spectroscopy.
Biochemistry 54: 2335-2345.

German DP, SD Allison. 2015.
Drying and substrate concentrations interact to inhibit decomposition of carbon substrates added to combusted Inceptisols from a boreal forest.
Biology and Fertility of Soils 51: 525-533.

Hünninghaus MC. 2015.
Protists in the soil food web of an arable field: Their density, taxonomic composition and functional role in carbon flux.
PhD Thesis. University of Cologne.

Van Ruth SM, R de Visser. 2015.
Provenancing flower bulbs by analytical fingerprinting: Convallaria majalis.
Agriculture 5: 17-29.

Dorado C, CA Mullen, AA Boateng. 2015.
Origin of carbon in aromatic and olefin products derived from HZSM-5 catalyzed co-pyrolysis of cellulose and plastics via isotopic labeling.
Applied Catalysis B: Environmental 162: 338-345.

Koranda M, C Kaiser, L Fuchslueger, B Kitzler, A Sessitsch, S Zechmeister-Boltenstern, A Richter. 2014.
Fungal and bacterial utilization of organic substrates depends on substrate complexity and N availability.
FEMS Microbiology Ecology 87: 142–152.

Bengtsson MM, K Wagner, NR Burns, ER Herberg, W Wanek, LA Kaplan, TJ Battin. 2014.
No evidence of aquatic priming effects in hyporheic zone microcosms.
Nature Scientific Reports 4, Article number: 5187.

Whitaker J, N Ostle, NP McNamara, AT Nottingham, RD Bardgett, AW Stott, N Salinas, AJQ Ccahuana, P Meir. 2014.
Microbial carbon mineralization in tropical lowland and montane forest soils of Peru.
Frontiers in Microbiology 5: 720.

Dibbern D. 2014.
Key prokaryotic populations contributing to carbon flow in an agricultural soil food web.
PhD Thesis. Technical University München.

Bücker M, C Jäger, D Pfeifer, B Unger. 2014.
Evidence of Si–O–C bonds in cellulosic materials modified by sol–gel-derived silica.
Wood Science Technology 48: 1033-1047.

Weidel E, M Schantz, E Richling. 2014.
A rapid method for quantifying chlorogenic acid levels in potato samples.
Journal of AOAC International 97: 902-907.

Wild B, J Schnecker, RJE Alves, P Barsukov, J Bárta, P Capek, N Gentsch, A Gittel, G Guggenberger, N Lashchinskiy, R Mikutta, O Rusalimova, H Santrucková, O Shibistova, T Urich, M Wazka, G Zrazhevskaya, A Richter. 2014.
Input of easily available organic C and N stimulates microbial decomposition of soil organic matter in arctic permafrost soil.
Soil Biology and Biochemistry 75: 143–151.

Darjany LE, CR Whitcraft, JG Dillon. 2014.
Lignocellulose-responsive bacteria in a southern California salt marsh identified by stable isotope probing.
Frontiers in Microbiology 5: 263.

Schmidt O, MA Horn, S Kolb, HL Drake. 2014.
Temperature impacts differentially on the methanogenic food web of cellulose-supplemented peatland soil.
Environmental Microbiology 17: 720-734.

Kramer S. 2014.
Effects of resource availability and quality on soil microorganisms and their carbon assimilation.
PhD Thesis. University Hohenheim.

Frost G, ML Sleeth, M Sahuri-Arisoylu, B Lizarbe, S Cerdan, L Brody, J Anastasovska, S Ghourab, M Hankir, S Zhang, D Carling, JR Swann, G Gibson, A Viardot, D Morrison, EL Thomas, JD Bell. 2014.
The short-chain fatty acid acetate reduces appetite via a central homeostatic mechanism.
NATURE Communications 5: 3611.

Strasser F. 2014.
Investigating complex carbon degradation in a beech forest soil and first insights into the application of single-cell methods to detect active microorganisms in soil systems.
MsC Thesis. University of Vienna.

Leung H. 2014.
Long-term effects of timber harvesting on cellulolytic microbial communities in North American coniferous forest soils.
MsC Thesis. University of British Columbia.

Whitaker J, N Ostle, AT Nottingham, A Ccahuana, N Salinas, RD Bardgett, P Meir, NP McNamara. 2014.
Microbial community composition explains soil respiration responses to changing carbon inputs along an Andes-to-Amazon elevation gradient.
Journal of Ecology 102: 1058-1071.

Tannock GW, B Lawley, K Munro, IM Sims, J Lee, CA Butts, N Roy. 2014.
RNA-stable isotope probing (RNA-SIP) shows carbon utilization from inulin by specific bacterial populations in the large bowel of rats.
Applied and Environmental Microbiology 80: 2240-2247.

Torres IF, F Bastida, T Hernández, P Bombach, HH Richnow, C García. 2014.
The role of lignin and cellulose in the carbon-cycling of degraded soils under semiarid climate and their relation to microbial biomass.
Soil Biology and Biochemistry 75: 152-160.

Wu Y, R Conrad. 2014.
Ammonia oxidation dependent growth of group I.1b thaumarchaeota in acidic red soil microcosms.
FEMS Microbiology Ecology 89: 127-134.

Johnson RL, K Schmidt-Rohr. 2014.
Quantitative solid-state 13C NMR with signal enhancement by multiple cross polarization.
Journal of Magnetic Resonance 239: 44-49.

Warner D, J Dijkstra, WH Hendriks, WF Pellikaan. 2014.
Stable isotope-labelled feed nutrients to assess nutrient-specific feed passage kinetics in ruminants.
Journal of the Science of Food and Agriculture 94: 819-824.

Kirkby CA, AE Richardson, LJ Wade, JB Passioura, GD Batten, C Blanchard, JA Kirkegaard. 2014.
Nutrient availability limits carbon sequestration in arable soils.
Soil Biology and Biochemistry 68: 402-409.

Lam L, R Soong, A Sutrisno, R de Visser, MJ Simpson, H Wheeler, M Campbell, WE Maas, M Fey, A Gorissen, H Hutchins, B Andrew, JO Struppe, S Krishnamurthy, R Kumar, M Monette, H Stronks, A Hume, AJ Simpson. 2014.
Comprehensive multiphase NMR spectroscopy of intact 13C labeled seeds.
Journal of Agricultural and Food Chemistry 62: 407-415.

Koranda M. 2013.
Effects of resource availability and microbial community composition on microbial decomposition processes in beech forest soil.
PhD Thesis. University of Wien.

Koranda M, C Kaiser, L Fuchslueger, B Kitzler, A Sessitsch, S Zechmeister-Boltenstern, A Richter. 2013.
Seasonal variation in functional properties of microbial communities in beech forest soil.
Soil Biology and Biochemistry 60: 95-104.

Chatzinotas A, S Schellenberger, K Glaser, S Kolb. 2013.
Assimilation of Cellulose-Derived Carbon by Microeukaryotes in Oxic and Anoxic Slurries of an Aerated Soil.
Applied and Environmental Biology 79: 5777-5781.

Carpenter KJ, PK Weber, ML Davisson, J Pett-Ridge, MI Haverty, PJ Keeling. 2013.
Correlated SEM, FIB-SEM, TEM, and NanoSIMS imaging of microbes from the hindgut of a lower termite: Methods for in situ functional and ecological studies of uncultivable microbes.
Microscopy and Microanalysis 19: 1490-1501.

Warner D. 2013.
Passage of feed in dairy cows : use of stable isotopes to estimate passage kinetics through the digestive tract of dairy cows.
PhD Thesis. Wageningen University.

Bueschl C, B Kluger, M Lemmens, G Adam, G Wiesenberger, V Maschietto, A Marocco, J Strauss, S Bödi, GG Thallinger, R Krska, R Schuhmacher. 2013.
A novel stable isotope labelling assisted workflow for improved untargeted LC–HRMS based metabolomics research.
Metabolomics 10: 754-769.

Warner D, LMM Ferreira, MJH Breuer, J Dijkstra, WF Pellikaan. 2013.
Stable isotope labelled plant wax n-alkanes to determine digesta passage through the gastrointestinal tract of ruminants.
PLOS ONE 8: e75496.

Warner D, J Dijkstra, S Tamminga, WF Pellikaan. 2013.
Passage kinetics of concentrates in dairy cows measured with carbon isotopes.
Animal 7: 1935-1943.

Erhagen B. 2013.
Temperature Sensitivity of Soil Carbon Decomposition – Molecular Controls and Environmental Feedbacks
PhD Thesis. University of Umea.

Warner D, J Dijkstra, WH Hendriks, WF Pellikaan. 2013.
Passage kinetics of stable isotope labeled grass silage fibre and fibre-bound protein through the gastrointestinal tract of dairy cows.
Journal Dairy Science 96: 7904-7917.

Komatsu T, J Kikuchi. 2013.
Comprehensive signal assignment of 13C-labeled lignocellulose using multidimensional solution NMR and 13C chemical shift comparison with solid-state NMR.
Analytical Chemistry 85: 8857-8865.

Luz Cayuela M, P Kuikman, R Bakker, JW van Groenigen. 2013.
Tracking C and N dynamics and stabilization in soil amended with wheat residue and its corresponding bioethanol by-product: a 13C/15N study.
Global Change Biology Bioenergy 2: 201-213.

Warner D, J Dijkstra, WH Hendriks, WF Pellikaan. 2013.
Passage kinetics of 13C-labeled corn components through the gastrointestinal tract of dairy cows.
Journal Dairy Science 96: 5844–5858.

Komatsu T, J Kikuchi. 2013.
Selective signal detection in solid-state NMR using rotor-synchronized dipolar dephasing for the analysis of hemicellulose in lignocellulosic biomass.
The Journal of Physical Chemistry Letters 4: 2279−2283.

Nakabayashi R, Y Sawada, Y Yamada, M Suzuki, MY Hirai, T Sakurai, K Saito. 2013.
Combination of liquid chromatography−Fourier transform ion cyclotron resonance-Mass Spectrometry with 13C ‑labeling for chemical assignment of sulfur-containing metabolites in onion bulbs.
Analytical Chemistry 85: 1310-1315.

Hunter WR, A Jamieson, VAI Huvenne, U Witte. 2013.
Sediment community responses to marine vs. terrigenous organic matter in a submarine canyon.
Biogeosciences 10: 67–80.

Foston M, R Samuel, AJ Ragauskas. 2012.
13C cell wall enrichment and ionic liquid NMR analysis: progress towards a high-throughput detailed chemical analysis of the whole plant cell wall.
Analyst 137: 3904-3909.

Semenov AV, MC Pereira e Silva, A Szturc-Koetsier, H Schmitt, J Falcão Salles, JD van Elsas. 2012.
Impact of incorporated fresh 13C potato tissues on the bacterial and fungal community composition of soil.
Soil Biology and Biochemistry 49: 88-95.

Štursová M, L Žifčáková, MB Leigh, R Burgess, P Baldrian. 2012.
Cellulose utilisation in forest litter and soil: identification of bacterial and fungal decomposers.
FEMS Microbiology Ecology 80: 735-746.

Foston M, R Katahira, E Gjersing, MF Davis, AJ Ragauskas. 2012. (see Applications)
Solid-state selective 13C excitation and spin diffusion NMR to resolve spatial dimensions in plant cell walls.
Journal of Agricultural and Food Chemistry 60: 1419-1427.

Paul BK, IM Lubbers, JW van Groenigen. 2012.
Residue incorporation depth is a controlling factor of earth-worm induced nitrous oxide emissions.
Global Change Biology 18: 1141-1151.

Kiers TE, M Duhamel, Y Beesetty, JA Mensah, O Franken, E Verbruggen, CR Fellbaum, GA Kowalchuk, MM Hart, A Bago, TM Palmer, SA West, P Vandenkoornhuyse, J Jansa, H Bücking. 2011. (see Applications)
Reciprocal rewards stabilize cooperation in the mycorrhizal symbiosis.
SCIENCE 333: 880-882.

Gorissen A, NU Kraut, R de Visser, M de Vries, H Roelofsen, RJ Vonk. 2011. (see Applications)
No de novo sulforaphane biosynthesis in broccoli seedlings.
Food Chemistry 127: 192-196. Ask a reprint

German, DP, SS Chacon, SD Allison. 2011.
Substrate concentration and enzyme allocation can affect rates of microbial decomposition.
Ecology 92: 1471-1480.

Hagl S, H Deusser, B Soyalan, C Janzowski, F Will, H Dietrich, F Albert, S Rohner, E Richling. 2011.
Colonic availability of polyphenols and D-(-)-quinic acid after apple smoothie consumption.
Molecular Nutrition & Food Research 55: 368-377.

Taylor DL, IC Herriott, KE Stone, JW McFarland, MG Booth, MB Leigh. 2010.
Structure and resilience of fungal communities in Alaskan boreal forest soils.
Canadian Journal of Forest Research 40: 1288–1301.

Kovatcheva-Datchary P. 2010.
Analyzing the functionality of the human Intestinal microbiota by stable isotope probing.
PhD Thesis Wageningen University.

Binsl TW, AA de Graaf, K Venema, J Heringa, A Maathuis, P de Waard, JHGM van Beek. 2010.
Measuring non-steady-state metabolic fluxes in starch-converting faecal microbiota in vitro.
Beneficial Microbes 1: 391-405.

Venema K, AA de Graaf, AJH Maathuis, P Kovatcheva-Datchary, H Smidt. 2010.
Fermentation in the large intestine unravelled using 13C-labelled substrates: implications for obesity and gut health.
In: Van der Kamp JW, Jones J, McCleary B, Topping D, eds. Dietary fibre: new frontiers for food and health: 539-554. Wageningen Acad. Publishers.

Nocentini C, B Guenet, E di Mattia, G Certini, G Bardoux, C Rumpel. 2010.
Charcoal mineralisation potential of microbial inocula from burned and unburned forest soil with and without substrate addition.
Soil Biology and Biochemistry 42: 1472-1478

May M, J Kuo, M Gray, I Knyazhansky, CT Tan. 2010.
Temperature zonal combustion reactor for the 15-nitrogen and 13-carbon isotopic determination of enriched biosynthetic materials.
Industrial and Engineering Chemical Research 49: 4036-4043.

Schellenberger S, S Kolb, HL Drake. 2010.
Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen. (see Applications)
Environmental Microbiology 12: 845-861.

Erk T, H Bergmann, E Richling. 2009.
A novel method for the quantification of quinic acid in food using stable isotope dilution analysis. (see Applications)
Journal of AOAC International 92: 730-733.

Kovatcheva-Datchary P, M Egbert, A Maathuis, M Rajilic-Stojanovic, AA de Graaf, H Smidt, WM de Vos, K Venema. 2009 (Award winning publication).
Linking phylogenetic identities of bacteria to starch fermentation in an in vitro model of the large intestine by RNA-based stable isotope probing. (see Applications)
Environmental Microbiology 11: 914-926.

Bastias BA, IA Anderson, J Ignacio-Castro, PI Parkin, JI Prosser, JWG Cairney. 2009.
Influence of repeated prescribed burning on incorporation of 13C from cellulose by forest soil fungi as determined by RNA stable isotope probing. (see Applications)
Soil Biology and Biochemistry 41: 467-472.

Waldrop MP, JW Harden. 2008.
Interactive effects of wildfire and permafrost on microbial communities and soil processes in an Alaskan black spruce forest. (see Applications)
Global Change Biology 14: 1-12.

Cristescu SM, ST Persijn, S te Lintel Hekkert, FJM Harren. 2008.
Laser-based systems for trace gas detection in life sciences.
Applied Physics B 92: 343-349.

Vigano I, H van Weelden, R Holzinger, F Keppler, T Röckmann. 2008.
Effects of UV radiation and temperature on the emission of methane from plant biomass and structural components.
Biogeosciences Discussions 5: 243-270.

Larsen T, A Gorissen, PH Krogh, M Ventura, J Magid. 2007.
Assimilation dynamics of soil carbon and nitrogen by wheat roots and Collembola.
Plant and Soil 295: 253-264. Ask a reprint

Dueck TA, R. de Visser, H Poorter, S Persijn, A Gorissen, W de Visser, A Schapendonk, J Verhagen, J Snel, FJM. Harren, AKY Ngai, F Verstappen, H Bouwmeester, LACJ Voesenek, A van der Werf. 2007.
No evidence for substantial aerobic methane emission by terrestrial plants: A 13C-labelling approach.
New Phytologist 175: 29-35. Ask a reprint

Dieleman JA. 2006. (see Applications)
Assimilate distribution in cucumber (Dutch).
Gewasnieuws komkommer 9(1): 2.

Kovatcheva-Datchary P, M Egbert, A Maathuis, H Smidt, WM de Vos, K Venema. 2005.
Which bacteria metabolise starch in the human colon.
Poster presentation Biomedicine in the Post-Genomic Era, Dec 1-3, Mexico City.

Müller K, S Marhan, E Kandeler, C Poll. 2017.
Carbon flow from litter through soil microorganisms: From incorporation rates to mean residence times in bacteria and fungi.
Soil Biology & Biochemistry 115: 187-196.